Data Exploration - Data Files Tab
Data Files in the Data Exploration Tool
The Data Files Tab provides information about the data files that were returned by the filters applied to the INCLUDE cohort in the Data Exploration Tool.
Users can access the Data Files Tab by selecting it, next to the Biospecimens Tab in the Data Exploration Tool.
The Data Files Tab within the Data Exploration Tool of the INCLUDE Data Hub
Adding or Removing Data Columns
The columns in the Data Files Tab provide additional information about the data files returned from the user's query. 11 columns are displayed by default. Users can add or remove columns using the Gear icon in the top right of the tab.
Adding or removing columns to the Data Files Tab of the Data Exploration Tool.
The default values for the Data Files Tab are described in the table below.
| Column Title | Column Description |
|---|---|
| File Authorization (lock symbol) | Indicates whether or not the user is authorized to access this file. A closed lock means unauthorized (no access) while an open lock means authorized (access). |
| Data Access (shield symbol) | Indicates the access level of the given file. C is for "controlled tier" while R is for "registered tier." For more details about Data Access Tiers, see Applying for Access |
| File ID | A unique identifier which describes a single data file in the INCLUDE Data Hub. |
| Study Code | A short code representing the INCLUDE Study that the participant is enrolled in. Studies are described further in the Studies Tool |
| Experimental Strategy | The type of analysis used to generate the data file. |
| Participant ID | A unique identifier which describes a single participant in the INCLUDE Data Hub. |
| Data Type | A category describing the type of file. |
| Format | The specific format of the data file. |
| Size | The size of the given file. |
| Biospecimens | The number of biospecimens associated with this data file. Clicking the link in this column will apply a filter for just biospecimens for this data file and switch the Data Exploration Tool to the Biospecimens Tab |
| Participants | The number of participants associated with this data file. Clicking the link in this column will apply a filter for just participants for this data file and switch the Data Exploration Tool to the Participants Tab. |
Moving to CAVATICA for Analysis
Users can analyze the files identified in the Data Exploration Tool in CAVATICA, the INCLUDE DCC's cloud-based analysis platform.
After selecting data files in the table, click the Analyze in CAVATICA button. Choose your desired CAVATICA project and then click Copy Files. These files will be moved into your CAVATICA project for analysis.
Copying data files to a CAVATICA project for analysis in the Data Files Tab of the Data Exploration Tool.
Updated about 3 years ago